Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900513.1_cds_XP_016450548.1_44987
CDS Infomation

[gene=LOC107775333] [db_xref=GeneID:107775333] [protein=protein root UVB sensitive 1, chloroplastic-like isoform X2] [protein_id=XP_016450548.1] [location=complement(join(14879..15169,16375..16551,17203..17315,18233..18431,18815..18871,19184..19459,20287..21036))] [gbkey=CDS]
Sequence

ATGAGCTACGCCGGCCACGTTCTCTCCCTTCCCCGTTTAACTTCAGCGCCGTTTTCCCTT
CTTCCTCCGCAAACCACCGCCGGCACGCTCTTCTCTACCACCACAGCAAACCACTCTCCT
CGCTTTACTCCCCTTAAAATCCACAACCTGTCTCTTCGCCGCCCTTCAGCTTGCAGCAAC
AACCATAGTGGCGGCGGTGCTGATGGAAATGATGGCGGCGGCGGTGACAATGGAGGCGGC
GGTGATTGGTGGAGCAATTTCTTCAATTTTAATAACAAAAAATCTCCTCTCCTCCTCCTT
CCATTTTCCCGTAACGAAGATAGTTCTATTATTGATTCTATATTATCATGTAAGCCACTG
CTATTGTTCTTCGTATCAGCTTCTTCTTCAATTACGTGCTGCTTAATATTAGCTTCGTTC
GTACAAGCAAAAACAAAAAACGAAGAAAACTGTAGAGAAATTGTGTATGAAATTAAAGGA
GGAAGGCGGATTGAACTTGAGCTGGATAATTCAAAGGATGAATTTATTCTTCCGAAGACA
ATGTGGTCACGTTTGTTATTTAACCCTAACTCCTTCTCTTCGGGTAGTGGTTATGTTTCA
AATTTGTGGATGCAATGCAAGGAATTAACGATGAATTTGCTGTTGCCTGAGGGGTTTCCG
GAGAGTGTGACGAGTGATTATTTGGAGTATTCAATCTGGAGAGGGGTTCAAGGTCTTGCT
GCACAAATTAGTGGTGTTCTTGCTACCCAGGCCTTACTTTACGCCGTTGGATTAGGGAAA
GGAGCTATTCCTACTGCTGCAGCTGTCAATTGGGTGCTTAAGGATGGCATTGGATATCTT
AGCAAGATTCTTTTGTCAAATTATGGCAGGCATTTTGATGTCAATCCTAAGAGCTGGAGG
CTGTTTGCAGACCTTTTGGAGAATGCTGCTTATGGGCTGGAGATTTTGACCCCTGCCTTC
CCACATCTGTTTGTTCCTATCGGAGCTGTTGCTGGAGCAGGGAGATCAGCCGCTTCATTA
ATCCAGGCTGCTACAAGAAGCTGCTTCTATGCGGGTTTTGCTGCTCAGAGGAATTTCGCT
GAGGTGATTGCAAAGGGTGAAGCTCAAGGAATGGTGAGCAAAGGAGTTGGAATCATGCTT
GGCATTGCACTGGCTAACTGCACCCGCTCTTCTACATCTCTTGCTCTTGCTTCTTTTGGA
GTGATAACTTGGATCCACATGTTCTGTAATCTGAAGTCATATCAGTCCATTCAACTAAGG
ACTTTAAATCCTTATCGAGCAAGTTTAGTCTTCAGTGAGTATCTGCTCAGTGGTCTGGTT
CCTTCAGTTAAAGAGGTCAATGATGAGGAGCCTGTTTTCCCAGCTGCTCTTTTAAATCGA
AAGGCAGCACATGAAACACAAACGGAAGTGCTTTCTGTCAATGCTAAGCAAGCAGCTGCT
AGGATTGTGCAGCGGTTGCAGCTAGGTTCTAAACTTTCTGATGTTGCTACTAGTCGAGAA
GATGTGCTTGCTCTGTTTGAACTGTACAAGAATGAAGGTTACATTTTGACTGAGCAAGAA
GGAAGATTTTGTATTGTGCTGAAAGAAAGTTCATCGCCACAAGATATGTTGAAGTCATTG
TTTCATGTCAATTACCTGTACTGGTTGGAGAAAAATGCAGGAATCAAGTCGAGCAGTGTA
GCTAATGACTGCAGGCCTGGGGGAAGGCTGCAGATATCTTTGGAGTATGTTGAGAGAGAG
TTTAATCATGTTAAAAATGATGGTGAAGTAGCAGGTTGGGTGATTGACAGTCTCATTGCA
AGGCCTTTGCCAAATCGAATTCGCTTGGGTTATGCAGCTGTATCTTCTGTTGCAGAAGGT
TGA

Peptide Sequence

PEP ID

XP_016450548.1
PEP Infomation

PREDICTED: protein root UVB sensitive 1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MSYAGHVLSLPRLTSAPFSLLPPQTTAGTLFSTTTANHSPRFTPLKIHNLSLRRPSACSN
NHSGGGADGNDGGGGDNGGGGDWWSNFFNFNNKKSPLLLLPFSRNEDSSIIDSILSCKPL
LLFFVSASSSITCCLILASFVQAKTKNEENCREIVYEIKGGRRIELELDNSKDEFILPKT
MWSRLLFNPNSFSSGSGYVSNLWMQCKELTMNLLLPEGFPESVTSDYLEYSIWRGVQGLA
AQISGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGIGYLSKILLSNYGRHFDVNPKSWR
LFADLLENAAYGLEILTPAFPHLFVPIGAVAGAGRSAASLIQAATRSCFYAGFAAQRNFA
EVIAKGEAQGMVSKGVGIMLGIALANCTRSSTSLALASFGVITWIHMFCNLKSYQSIQLR
TLNPYRASLVFSEYLLSGLVPSVKEVNDEEPVFPAALLNRKAAHETQTEVLSVNAKQAAA
RIVQRLQLGSKLSDVATSREDVLALFELYKNEGYILTEQEGRFCIVLKESSSPQDMLKSL
FHVNYLYWLEKNAGIKSSSVANDCRPGGRLQISLEYVEREFNHVKNDGEVAGWVIDSLIA
RPLPNRIRLGYAAVSSVAEG

Transcript Sequence

Gene sequence data has not been registered.